CLSI MM18 A : 1ED 2008
Superseded
A superseded Standard is one, which is fully replaced by another Standard, which is a new edition of the same Standard.
A superseded Standard is one, which is fully replaced by another Standard, which is a new edition of the same Standard.
INTERPRETIVE CRITERIA FOR IDENTIFICATION OF BACTERIA AND FUNGI BY DNA TARGET SEQUENCING
03-27-2023
01-12-2013
Abstract
Committee Membership
Foreword
1 Scope
2 Introduction
3 Standard Precautions
4 Terminology
4.1 Definitions
4.2 Abbreviations and Acronyms
5 Approach to DNA Target Sequencing
5.1 Primer Design
5.2 Controls
5.3 Protocol and Instrument Requirements
5.4 Overview of Sequence Data
5.5 Selection of Reference Databases
5.6 Sequence Comparison for Identification
5.7 Generalized Approach to Sequence-Based Identification
for Bacteria (excluding Mycobacteria and Actinomycetes)
6 Interpretive Criteria of Identity Scores
6.1 Staphylococci and Related Gram-Positive Cocci
6.2 Streptococcus spp., Enterococcus spp., and
Streptococcal-Like Organisms
6.3 Glucose Nonfermenting Gram-Negative Bacilli
6.4 Campylobacterales
6.5 Gram-Positive Anaerobes
6.6 Gram-Negative Anaerobes
6.7 Coryneform Gram-Positive Bacilli
6.8 Aerobic Actinomycetes
6.9 Mycobacterium sp.
6.10 Bacterial Agents of Bioterrorism
6.11 Fungi
7 Suggestions for Result Reporting
References
Summary of Delegate Comments and Committee Responses
The Quality Management System Approach
Related CLSI Reference Materials
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